MSIght
Contents:
MSIght
Modules
API Reference
MSIght
»
Index
Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
I
|
L
|
M
|
O
|
P
|
R
|
S
A
apply_bspline_transform_to_msi() (in module MSIght.refactor_mz_image_extract)
apply_dimensionality_reduction() (in module MSIght.refactor_common_functions)
B
bin_he_image() (in module MSIght.refactor_histology_preprocess)
C
create_intensity_matrix() (in module MSIght.refactor_common_functions)
D
display_and_save_image() (in module MSIght.refactor_affine_transform)
E
extract_mz_image_transform() (in module MSIght.refactor_mz_image_extract)
F
foreground_extract() (in module MSIght.refactor_histology_preprocess)
foreground_mask_make() (in module MSIght.refactor_histology_preprocess)
G
global_proteomics_search() (in module MSIght.refactor_fragger_process)
I
interpolate_and_visualize() (in module MSIght.refactor_interpolation)
interpolate_MSI() (in module MSIght.refactor_interpolation)
L
load_and_preprocess_imzml() (in module MSIght.refactor_common_functions)
load_he_image() (in module MSIght.refactor_histology_preprocess)
M
manual_register_he_msi() (in module MSIght.refactor_manual_affine)
(in module MSIght.refactor_manual_affine_transform)
module
MSIght.refactor_affine_transform
,
[1]
MSIght.refactor_bspline
,
[1]
MSIght.refactor_common_functions
,
[1]
MSIght.refactor_fragger_process
,
[1]
MSIght.refactor_histology_preprocess
,
[1]
MSIght.refactor_interpolation
,
[1]
MSIght.refactor_manual_affine
,
[1]
MSIght.refactor_manual_affine_transform
,
[1]
MSIght.refactor_mz_image_extract
,
[1]
MSIght.refactor_affine_transform
module
,
[1]
MSIght.refactor_bspline
module
,
[1]
MSIght.refactor_common_functions
module
,
[1]
MSIght.refactor_fragger_process
module
,
[1]
MSIght.refactor_histology_preprocess
module
,
[1]
MSIght.refactor_interpolation
module
,
[1]
MSIght.refactor_manual_affine
module
,
[1]
MSIght.refactor_manual_affine_transform
module
,
[1]
MSIght.refactor_mz_image_extract
module
,
[1]
O
overlay_msi_he() (in module MSIght.refactor_mz_image_extract)
P
perform_bspline() (in module MSIght.refactor_bspline)
preprocess_he() (in module MSIght.refactor_histology_preprocess)
process_fragger() (in module MSIght.refactor_fragger_process)
process_fragger_gene() (in module MSIght.refactor_fragger_process)
R
red_channel_extract() (in module MSIght.refactor_histology_preprocess)
register_he_msi() (in module MSIght.refactor_affine_transform)
S
show_msi_he_coords() (in module MSIght.refactor_manual_affine)
smooth_he_image() (in module MSIght.refactor_histology_preprocess)